.. pysimm documentation master file, created by sphinx-quickstart on Fri Sep 27 14:07:00 2019. You can adapt this file completely to your liking, but it should at least contain the root `toctree` directive. pysimm v0.2.3 Reference Document ================================== pysimm is a python package designed to facilitate structure generation, simulation, and modification of molecular systems by providing a collection of simulation tools and smooth integration with highly optimized third party software. Abstraction layers enable a standardized methodology to assign various force field models to molecular systems and perform simple simulations. To read more, see our publication in SoftwareX_. .. _softwarex: http://dx.doi.org/10.1016/j.softx.2016.12.002 Click below for pysimm's full documentation: .. toctree:: :maxdepth: 2 pysimm